U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SLC35A3 solute carrier family 35 member A3 [ Sus scrofa (pig) ]

Gene ID: 553107, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
SLC35A3provided by VGNC
Official Full Name
solute carrier family 35 member A3provided by VGNC
Primary source
VGNC:VGNC:98860
See related
Ensembl:ENSSSCG00000006871
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Also known as
S35A3
Expression
Ubiquitous expression in kidney (RPKM 5.7), liver (RPKM 4.9) and 8 other tissues See more
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SLC35A3 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
10
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 4 NC_010446.5 (118102800..118153144, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 4 NC_010446.4 (129697181..129744254)

Chromosome 4 - NC_010446.5Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 39 Neighboring gene tRNA methyltransferase 13 homolog Neighboring gene SAS-6 centriolar assembly protein Neighboring gene major facilitator superfamily domain containing 14A Neighboring gene uncharacterized LOC110260374 Neighboring gene amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Gene expression profiling, chromosome assignment and mutational analysis of the porcine Golgi-resident UDP-N-acetylglucosamine transporter SLC35A3. Andersen PK, et al. Mol Membr Biol, 2007 Sep-Dec. PMID 17710655
  2. Isolation, sequence identification and tissue expression distribution of three novel porcine genes--RAB14, S35A3 and ITM2A. Liu GY, et al. Mol Biol Rep, 2008 Jun. PMID 17380425

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The complete coding sequences of three porcine genes--RAB14, S35A3 and ITM2A were amplified and nucleotide sequence and tissue expression were analysed.
    Title: Isolation, sequence identification and tissue expression distribution of three novel porcine genes--RAB14, S35A3 and ITM2A.
  2. Substitutions of glycines 190, 215 and 254, which are invariant positions in the SLC35A subfamilies affected activity negatively.
    Title: Gene expression profiling, chromosome assignment and mutational analysis of the porcine Golgi-resident UDP-N-acetylglucosamine transporter SLC35A3.
Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pyrimidine nucleotide-sugar transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
UDP-N-acetylglucosamine transporter

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001024588.1 → NP_001019759.1  UDP-N-acetylglucosamine transporter

    See identical proteins and their annotated locations for NP_001019759.1

    Status: PROVISIONAL

    Source sequence(s)
    AY996816
    UniProtKB/TrEMBL
    A0A0B8S009, A0A4X1TU82, F1S558, Q0GA84, Q52NI9
    Related
    ENSSSCP00000061893.1, ENSSSCT00000068635.1
    Conserved Domains (2) summary
    TIGR00803
    Location:86 → 312
    nst; UDP-galactose transporter
    pfam04142
    Location:1 → 313
    Nuc_sug_transp; Nucleotide-sugar transporter

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010446.5 Reference Sscrofa11.1 Primary Assembly

    Range
    118102800..118153144 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005663640.3 → XP_005663697.2  UDP-N-acetylglucosamine transporter isoform X1

    Conserved Domains (1) summary
    pfam04142
    Location:101 → 413
    Nuc_sug_transp; Nucleotide-sugar transporter

  2. XM_005663641.3 → XP_005663698.1  UDP-N-acetylglucosamine transporter isoform X3

    UniProtKB/TrEMBL
    A0A8D0NL83
    Related
    ENSSSCP00000073241.1, ENSSSCT00000083655.1
    Conserved Domains (2) summary
    TIGR00803
    Location:98 → 324
    nst; UDP-galactose transporter
    pfam04142
    Location:13 → 325
    Nuc_sug_transp; Nucleotide-sugar transporter

  3. XM_021088749.1 → XP_020944408.1  UDP-N-acetylglucosamine transporter isoform X2

    UniProtKB/TrEMBL
    A0A8D0NL83
    Conserved Domains (1) summary
    pfam04142
    Location:22 → 334
    Nuc_sug_transp; Nucleotide-sugar transporter
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials