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rbbp9 retinoblastoma binding protein 9 [ Danio rerio (zebrafish) ]

Gene ID: 553083, updated on 2-Nov-2024

Summary

Official Symbol
rbbp9provided by ZNC
Official Full Name
retinoblastoma binding protein 9provided by ZNC
Primary source
ZFIN:ZDB-GENE-050208-692
See related
Ensembl:ENSDARG00000040713 AllianceGenome:ZFIN:ZDB-GENE-050208-692
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
im:7247963; zgc:152807; si:ch211-258l4.7
Summary
Predicted to enable hydrolase activity. Orthologous to human RBBP9 (RB binding protein 9, serine hydrolase). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See rbbp9 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (38946439..38951354, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (38959694..38964609, complement)

Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene SUMO specific peptidase 5 Neighboring gene nuclear cap binding protein subunit 2 Neighboring gene sirtuin 7 Neighboring gene Rho guanine nucleotide exchange factor (GEF) 3 Neighboring gene transcription activation suppressor a

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001042748.1NP_001036213.1  serine hydrolase RBBP9

    See identical proteins and their annotated locations for NP_001036213.1

    Status: PROVISIONAL

    Source sequence(s)
    AL953867
    UniProtKB/TrEMBL
    A0A8N7XJ88, F1Q4W1, Q1MT41
    Related
    ENSDARP00000095196.4, ENSDART00000104423.6
    Conserved Domains (1) summary
    cl21494
    Location:3183
    Abhydrolase; alpha/beta hydrolases

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007133.7 Reference GRCz11 Primary Assembly

    Range
    38946439..38951354 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)