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LOC5521813 chondroitin sulfate N-acetylgalactosaminyltransferase 2 [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 5521813, updated on 30-Nov-2023

Summary

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Gene symbol
LOC5521813
Gene description
chondroitin sulfate N-acetylgalactosaminyltransferase 2
Locus tag
NEMVEDRAFT_v1g177601
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
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Genomic context

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Location:
chromosome: 2
Exon count:
1
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 2 NC_064035.1 (14659773..14662459)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834411.1 (1834333..1837028)

Chromosome 2 - NC_064035.1Genomic Context describing neighboring genes Neighboring gene alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase Neighboring gene N-alpha-acetyltransferase 20 Neighboring gene uncharacterized LOC125556759 Neighboring gene vacuolar protein 8 Neighboring gene uncharacterized LOC116604462 Neighboring gene cAMP-dependent protein kinase type II regulatory subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate N-acetylgalactosaminyltransferase 2
Names
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064035.1 Reference jaNemVect1.1

    Range
    14659773..14662459
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001641449.3 → XP_001641499.2  chondroitin sulfate N-acetylgalactosaminyltransferase 2

    Conserved Domains (1) summary
    cl11394
    Location:150 → 514
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
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