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LOC5520358 galactosylceramide sulfotransferase [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 5520358, updated on 30-Nov-2023

Summary

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Gene symbol
LOC5520358
Gene description
galactosylceramide sulfotransferase
Locus tag
NEMVEDRAFT_v1g84172
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
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Genomic context

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See LOC5520358 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 1 NC_064034.1 (9236071..9238792)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834405.1 (1064288..1067014, complement)

Chromosome 1 - NC_064034.1Genomic Context describing neighboring genes Neighboring gene putative histone-lysine N-methyltransferase PRDM6 Neighboring gene uncharacterized LOC5520431 Neighboring gene uncharacterized LOC116603703 Neighboring gene uncharacterized LOC116603705 Neighboring gene galactose-3-O-sulfotransferase 2 Neighboring gene galactose-3-O-sulfotransferase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylceramide sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactosylceramide sulfotransferase
Names
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064034.1 Reference jaNemVect1.1

    Range
    9236071..9238792
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001640217.3 → XP_001640267.2  galactosylceramide sulfotransferase

    Conserved Domains (1) summary
    cl22970
    Location:63 → 393
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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