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LOC551676 methylmalonic aciduria and homocystinuria type D homolog, mitochondrial [ Apis mellifera (honey bee) ]

Gene ID: 551676, updated on 2-Oct-2024

Summary

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Gene symbol
LOC551676
Gene description
methylmalonic aciduria and homocystinuria type D homolog, mitochondrial
Gene type
protein coding
RefSeq status
MODEL
Organism
Apis mellifera
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
Also known as
GB55303
Orthologs
fruit fly all
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Genomic context

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See LOC551676 in Genome Data Viewer
Location:
chromosome: LG1
Exon count:
6
Annotation release Status Assembly LG Location
104 current Amel_HAv3.1 (GCF_003254395.2) LG1 NC_037638.1 (14288984..14290951, complement)
103 previous assembly Amel_4.5 (GCF_000002195.4) LG1 NC_007070.3 (15621086..15622980)

Linkage Group LG1 - NC_037638.1Genomic Context describing neighboring genes Neighboring gene diaphanous related formin 1 Neighboring gene touch insensitive larva B Neighboring gene clavesin-2 Neighboring gene GTP-Rho-binding protein rhophilin Neighboring gene Roc2 protein Neighboring gene trehalose transporter 1 Neighboring gene serine/threonine-protein kinase PAK mbt

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Differential expression of endogenous plant cell wall degrading enzyme genes in the stick insect (Phasmatodea) midgut. Shelomi M, et al. BMC Genomics, 2014 Oct 21. PMID 25331961, Free PMC Article
  2. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
  3. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article
  4. Finding the missing honey bee genes: lessons learned from a genome upgrade. Elsik CG, et al. BMC Genomics, 2014 Jan 30. PMID 24479613, Free PMC Article
  5. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methylmalonic aciduria and homocystinuria type D homolog, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Amel_HAv3.1 Primary Assembly

Genomic

  1. NC_037638.1 Reference Amel_HAv3.1 Primary Assembly

    Range
    14288984..14290951 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006570621.3 → XP_006570684.1  methylmalonic aciduria and homocystinuria type D homolog, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_006570684.1

    UniProtKB/TrEMBL
    A0A7M7LPV7, A0A7M7R839, A0A8B6Z8G9, A0A8B7KMS9
    Conserved Domains (1) summary
    pfam10229
    Location:61 → 286
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein

  2. XM_006570620.3 → XP_006570683.1  methylmalonic aciduria and homocystinuria type D homolog, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_006570683.1

    UniProtKB/TrEMBL
    A0A7M7LPV7, A0A7M7R839, A0A8B6Z8G9, A0A8B7KMS9
    Conserved Domains (1) summary
    pfam10229
    Location:61 → 286
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein

  3. XM_016913483.2 → XP_016768972.1  methylmalonic aciduria and homocystinuria type D homolog, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A7M7LPV7, A0A7M7R839, A0A8B6Z8G9, A0A8B7KMS9
    Conserved Domains (1) summary
    pfam10229
    Location:61 → 286
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein

  4. XM_006570622.3 → XP_006570685.1  methylmalonic aciduria and homocystinuria type D homolog, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A7M7H4J8, A0A8B6ZCP5
    Conserved Domains (1) summary
    pfam10229
    Location:61 → 274
    DUF2246; Uncharacterized conserved protein (DUF2246)

  5. XM_624065.6 → XP_624068.2  methylmalonic aciduria and homocystinuria type D homolog, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_624068.2

    UniProtKB/TrEMBL
    A0A7M7LPV7, A0A7M7R839, A0A8B6Z8G9, A0A8B7KMS9
    Conserved Domains (1) summary
    pfam10229
    Location:61 → 286
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein
Nucleotide Protein Strain
Heading Accession and Version

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