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PBANKA_0609300 GPI mannosyltransferase 1, putative [ Plasmodium berghei ANKA ]

Gene ID: 55148665, updated on 5-Sep-2024

Summary

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Gene symbol
PBANKA_0609300
Gene description
GPI mannosyltransferase 1, putative
Locus tag
PBANKA_0609300
See related
PlasmoDB:PBANKA_0609300; VEuPathDB:PBANKA_0609300
Gene type
protein coding
RNA name
GPI mannosyltransferase 1, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium berghei ANKA (strain: ANKA)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Vinckeia)
Old locus tag
PBANKA_060930
Orthologs
Plasmodium falciparum all
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Genomic context

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See PBANKA_0609300 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
8
Sequence:
Chromosome: 6; NC_036164.2 (425980..428567)

Chromosome 6 - NC_036164.2Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene ncRNA Neighboring gene kinesin-7, putative Neighboring gene HSP20-like chaperone, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036164.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A comprehensive evaluation of rodent malaria parasite genomes and gene expression. Otto TD, et al. BMC Biol, 2014 Oct 30. PMID 25359557, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycosylphosphatidylinositol-mannosyltransferase I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 1, putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_036164.2 Reference assembly

    Range
    425980..428567
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034568622.1 → XP_034420594.1  GPI mannosyltransferase 1, putative [Plasmodium berghei ANKA]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0Y9V979, A0A509AJI4
    Conserved Domains (1) summary
    cl21590
    Location:33 → 438
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
Heading Accession and Version

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