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LOC5511342 glucoside xylosyltransferase 1 [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 5511342, updated on 30-Nov-2023

Summary

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Gene symbol
LOC5511342
Gene description
glucoside xylosyltransferase 1
Locus tag
NEMVEDRAFT_v1g167977
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
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Genomic context

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See LOC5511342 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 4 NC_064037.1 (17359893..17363821)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834317.1 (473979..477682)

Chromosome 4 - NC_064037.1Genomic Context describing neighboring genes Neighboring gene mediator of RNA polymerase II transcription subunit 31 Neighboring gene eukaryotic translation initiation factor 4H Neighboring gene uncharacterized LOC5511341 Neighboring gene palmitoyltransferase ZDHHC8 Neighboring gene F-box/WD repeat-containing protein 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucoside xylosyltransferase 1
Names
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064037.1 Reference jaNemVect1.1

    Range
    17359893..17363821
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001631670.3 → XP_001631720.1  glucoside xylosyltransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_001631720.1

    UniProtKB/TrEMBL
    A7S9E5
    Conserved Domains (2) summary
    COG1442
    Location:84 → 300
    RfaJ; Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis]
    cl11394
    Location:83 → 375
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_048726670.1 → XP_048582627.1  glucoside xylosyltransferase 1 isoform X2

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
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