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LOC550998 carbohydrate sulfotransferase 11 [ Apis mellifera (honey bee) ]

Gene ID: 550998, updated on 1-Oct-2024

Summary

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Gene symbol
LOC550998
Gene description
carbohydrate sulfotransferase 11
Gene type
protein coding
RefSeq status
MODEL
Organism
Apis mellifera
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
Also known as
GB48419
Orthologs
all
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Genomic context

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See LOC550998 in Genome Data Viewer
Location:
chromosome: LG10
Exon count:
5
Annotation release Status Assembly LG Location
104 current Amel_HAv3.1 (GCF_003254395.2) LG10 NC_037647.1 (6368455..6373447, complement)
103 previous assembly Amel_4.5 (GCF_000002195.4) LG10 NC_007079.3 (6446080..6450789)

Linkage Group LG10 - NC_037647.1Genomic Context describing neighboring genes Neighboring gene Protein kinase, cAMP-dependent, catalytic subunit 3 Neighboring gene sodium channel protein Nach Neighboring gene inactive hydroxysteroid dehydrogenase-like protein 1 Neighboring gene bZIP transcription factor crc

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Differential expression of endogenous plant cell wall degrading enzyme genes in the stick insect (Phasmatodea) midgut. Shelomi M, et al. BMC Genomics, 2014 Oct 21. PMID 25331961, Free PMC Article
  2. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
  3. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article
  4. Finding the missing honey bee genes: lessons learned from a genome upgrade. Elsik CG, et al. BMC Genomics, 2014 Jan 30. PMID 24479613, Free PMC Article
  5. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Amel_HAv3.1 Primary Assembly

Genomic

  1. NC_037647.1 Reference Amel_HAv3.1 Primary Assembly

    Range
    6368455..6373447 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006562831.3 → XP_006562894.1  carbohydrate sulfotransferase 11

    See identical proteins and their annotated locations for XP_006562894.1

    UniProtKB/TrEMBL
    A0A7M7GU60, A0A7M7LMZ9, A0A8B6YXM7, A0A8B6YXM8
    Conserved Domains (1) summary
    pfam03567
    Location:100 → 330
    Sulfotransfer_2; Sulfotransferase family

  2. XM_006562830.3 → XP_006562893.1  carbohydrate sulfotransferase 11

    See identical proteins and their annotated locations for XP_006562893.1

    UniProtKB/TrEMBL
    A0A7M7GU60, A0A7M7LMZ9, A0A8B6YXM7, A0A8B6YXM8
    Conserved Domains (1) summary
    pfam03567
    Location:100 → 330
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein Strain
Heading Accession and Version

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