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LOC5508760 nicotinate-nucleotide pyrophosphorylase [carboxylating] [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 5508760, updated on 30-Nov-2023

Summary

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Gene symbol
LOC5508760
Gene description
nicotinate-nucleotide pyrophosphorylase [carboxylating]
Locus tag
NEMVEDRAFT_v1g117116
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
Also known as
qprt; QAPRTase
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Genomic context

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See LOC5508760 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 2 NC_064035.1 (17873323..17874645, complement)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834270.1 (208130..209421)

Chromosome 2 - NC_064035.1Genomic Context describing neighboring genes Neighboring gene leucine-rich repeat extensin-like protein 3 Neighboring gene cuticle collagen 34 Neighboring gene glutamine-rich protein 2 Neighboring gene kinesin-related protein 4 Neighboring gene NACHT domain- and WD repeat-containing protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nicotinate-nucleotide diphosphorylase (carboxylating) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in NAD biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in quinolinate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nicotinate-nucleotide pyrophosphorylase [carboxylating]
Names
Quinolinate phosphoribosyltransferase
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064035.1 Reference jaNemVect1.1

    Range
    17873323..17874645 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001629275.3 → XP_001629325.3  nicotinate-nucleotide pyrophosphorylase [carboxylating]

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A7SG73.1 GenPept UniProtKB/Swiss-Prot:A7SG73

Gene LinkOut

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