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LOC5508293 xylosyltransferase 1 [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 5508293, updated on 6-Jun-2024

Summary

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Gene symbol
LOC5508293
Gene description
xylosyltransferase 1
Locus tag
NEMVEDRAFT_v1g118618
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
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Genomic context

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See LOC5508293 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
10
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 12 NC_064045.1 (6183509..6193033, complement)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834260.1 (333263..343380)

Chromosome 12 - NC_064045.1Genomic Context describing neighboring genes Neighboring gene histamine H2 receptor Neighboring gene netrin-1 Neighboring gene uncharacterized LOC5508298 Neighboring gene COP9 signalosome complex subunit 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heparan sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xylosyltransferase 1
Names
predicted protein
xylosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064045.1 Reference jaNemVect1.1

    Range
    6183509..6193033 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032377081.2 → XP_032232972.2  xylosyltransferase 1

    UniProtKB/TrEMBL
    A7SHI4
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials