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LOC5507671 delta(24)-sterol reductase [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 5507671, updated on 30-Nov-2023

Summary

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Gene symbol
LOC5507671
Gene description
delta(24)-sterol reductase
Locus tag
NEMVEDRAFT_v1g245603
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
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Genomic context

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See LOC5507671 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 1 NC_064034.1 (19485711..19500874, complement)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834245.1 (41942..57016, complement)

Chromosome 1 - NC_064034.1Genomic Context describing neighboring genes Neighboring gene BRISC and BRCA1-A complex member 1 Neighboring gene transitional endoplasmic reticulum ATPase Neighboring gene dopamine receptor 2 Neighboring gene dopamine receptor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables delta24(24-1) sterol reductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in steroid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta(24)-sterol reductase
Names
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064034.1 Reference jaNemVect1.1

    Range
    19485711..19500874 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001628254.3 → XP_001628304.1  delta(24)-sterol reductase

    See identical proteins and their annotated locations for XP_001628304.1

    UniProtKB/TrEMBL
    A7SJ62
    Conserved Domains (2) summary
    COG0277
    Location:116 → 506
    GlcD; FAD/FMN-containing dehydrogenase [Energy production and conversion]
    pfam01565
    Location:116 → 209
    FAD_binding_4; FAD binding domain
Nucleotide Protein
Heading Accession and Version

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