U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

S spike glycoprotein [ Infectious bronchitis virus ]

Gene ID: 55060242, updated on 18-Aug-2023

Summary

Go to the top of the page Help
Gene symbol
S
Gene description
spike glycoprotein
Locus tag
HO266_gp2
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Infectious bronchitis virus (isolate: Ind-TN92-03, nat-host: chicken)
Lineage
Viruses; Riboviria; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Gammacoronavirus; Igacovirus
Old locus tag
IBVgp2
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_048213.1 (20374..23835)

NC_048213.1Genomic Context describing neighboring genes Neighboring gene ORF 1a polyprotein;ORF1ab polyprotein Neighboring gene 3a protein;3b protein;3c protein Neighboring gene membrane glycoprotein Neighboring gene 5a protein;5b protein Neighboring gene nucleocapsid protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_048213.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Identification and Comparison of the Sialic Acid-Binding Domain Characteristics of Avian Coronavirus Infectious Bronchitis Virus Spike Protein.
    Title: Identification and Comparison of the Sialic Acid-Binding Domain Characteristics of Avian Coronavirus Infectious Bronchitis Virus Spike Protein.
  2. Three Amino Acid Changes in Avian Coronavirus Spike Protein Allow Binding to Kidney Tissue.
    Title: Three Amino Acid Changes in Avian Coronavirus Spike Protein Allow Binding to Kidney Tissue.
Submit: New GeneRIF Correction

General protein information

Go to the top of the page Help
Preferred Names
spike glycoprotein
YP_009824998.1
  • surface protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_048213.1 Reference assembly

    Range
    20374..23835
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009824998.1 spike glycoprotein [Infectious bronchitis virus]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0K1RMX2, A0A4Y5SXY5
    Conserved Domains (3) summary
    pfam01600
    Location:166 → 366
    Corona_S1; Coronavirus S1 glycoprotein
    cd21698
    Location:791 → 856
    CoV_Spike_S1-S2_S2; heptad repeat 1 [structural motif]
    cl40439
    Location:423 → 1083
    CoV_Spike_S1-S2_S2; S1/S2 cleavage region and the S2 fusion subunit of coronavirus spike (S) proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.