ifi30 interferon, gamma-inducible protein 30 [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: ifi30provided by Xenbase
Official Full Name: interferon, gamma-inducible protein 30provided by Xenbase
Primary source: Xenbase:XB-GENE-1002315
See related: Ensembl:ENSXETG00000025512
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as: GILT
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 1

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	1	NC_030677.2 (103924124..103944175, complement)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	1	NC_030677.1 (84907019..84926542, complement)

Chromosome 1 - NC_030677.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables oxidoreductase activity	IEA Inferred from Electronic Annotation more info
enables oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within immune system process	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in extracellular region	IEA Inferred from Electronic Annotation more info
located_in lysosome	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: gamma-interferon-inducible lysosomal thiol reductase

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001017196.2 → NP_001017196.1 gamma-interferon-inducible lysosomal thiol reductase precursor

Status: PROVISIONAL

Source sequence(s)

CR760545

UniProtKB/TrEMBL

A0A803KH02, A0A8J0PJ83

Related

ENSXETP00000054341.3, ENSXETT00000054341.3

Conserved Domains (1) summary

pfam03227
Location:60 → 161

GILT; Gamma interferon inducible lysosomal thiol reductase (GILT)

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

Range

103924124..103944175 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_012963420.1 → XP_012818874.1 gamma-interferon-inducible lysosomal thiol reductase isoform X1

UniProtKB/TrEMBL

A0A5S6M7J9, A0A803KH02, F6W947

Conserved Domains (1) summary

pfam03227
Location:60 → 161

GILT; Gamma interferon inducible lysosomal thiol reductase (GILT)