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pla2g12a phospholipase A2 group XIIA [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 549850, updated on 18-Sep-2024

Summary

Official Symbol
pla2g12aprovided by Xenbase
Official Full Name
phospholipase A2 group XIIAprovided by Xenbase
Primary source
Xenbase:XB-GENE-984826
See related
Ensembl:ENSXETG00000034989
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
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Genomic context

See pla2g12a in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (68684964..68697400, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (59212929..59225132, complement)

Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene GAR1 homolog, ribonucleoprotein Neighboring gene complement factor I Neighboring gene caspase 6 Neighboring gene adaptor related protein complex 1 associated regulatory protein

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 
enables phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within arachidonate secretion IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within lipid catabolic process IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within phospholipid metabolic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
group XIIA secretory phospholipase A2
NP_001017096.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001017096.2NP_001017096.1  group XIIA secretory phospholipase A2 precursor

    See identical proteins and their annotated locations for NP_001017096.1

    Status: PROVISIONAL

    Source sequence(s)
    CR761315
    UniProtKB/TrEMBL
    A9UL99, Q28GM9
    Related
    ENSXETP00000074177.2, ENSXETT00000083864.2
    Conserved Domains (1) summary
    pfam06951
    Location:29195
    PLA2G12; Group XII secretory phospholipase A2 precursor (PLA2G12)

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    68684964..68697400 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)