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SS1G_01009 hypothetical protein [ Sclerotinia sclerotiorum 1980 UF-70 ]

Gene ID: 5494389, updated on 16-Nov-2023

Summary

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Gene symbol
SS1G_01009
Gene description
hypothetical protein
Locus tag
SS1G_01009
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Sclerotinia sclerotiorum 1980 UF-70 (strain: 1980)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Sclerotinia
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Genomic context

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See SS1G_01009 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
4

NW_001820835.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001820835.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pectin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001820835.1 Reference assembly

    Range
    2604331..2605615
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001598870.1 → XP_001598920.1  hypothetical protein SS1G_01009 [Sclerotinia sclerotiorum 1980 UF-70]

    See identical proteins and their annotated locations for XP_001598920.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1D9PXT1, A7E6T4
    Conserved Domains (2) summary
    pfam00295
    Location:49 → 374
    Glyco_hydro_28; Glycosyl hydrolases family 28
    cl19188
    Location:148 → 353
    PL-6; Polysaccharide Lyase Family 6
Nucleotide Protein
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Gene LinkOut

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