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pole4 polymerase (DNA-directed), epsilon 4, accessory subunit [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 549359, updated on 4-Nov-2024

Summary

Official Symbol
pole4provided by Xenbase
Official Full Name
polymerase (DNA-directed), epsilon 4, accessory subunitprovided by Xenbase
Primary source
Xenbase:XB-GENE-5722002
See related
Ensembl:ENSXETG00000014422 AllianceGenome:Xenbase:XB-GENE-5722002
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Summary
Predicted to enable protein heterodimerization activity. Predicted to be located in nucleus. Orthologous to human POLE4 (DNA polymerase epsilon 4, accessory subunit). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See pole4 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 3 NC_030679.2 (41483735..41488381)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 3 NC_030679.1 (30696245..30701214, complement)

Chromosome 3 - NC_030679.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105945720 Neighboring gene serine/threonine kinase 10 Neighboring gene SH3 and PX domains 2B Neighboring gene uncharacterized LOC116409717 Neighboring gene neuralized E3 ubiquitin protein ligase 1B

Genomic regions, transcripts, and products

General protein information

Preferred Names
DNA polymerase epsilon subunit 4
Names
polymerase (DNA-directed), epsilon 4 (p12 subunit)
NP_001016605.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001016605.2NP_001016605.1  DNA polymerase epsilon subunit 4

    See identical proteins and their annotated locations for NP_001016605.1

    Status: PROVISIONAL

    Source sequence(s)
    CR760539
    UniProtKB/TrEMBL
    B1WB35, F7A3S9, Q28I81
    Related
    ENSXETP00000031543.3, ENSXETT00000031543.5
    Conserved Domains (1) summary
    pfam00808
    Location:38101
    CBFD_NFYB_HMF; Histone-like transcription factor (CBF/NF-Y) and archaeal histone

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030679.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    41483735..41488381
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)