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mrpl3 mitochondrial ribosomal protein L3 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 549348, updated on 17-Aug-2024

Summary

Official Symbol
mrpl3provided by Xenbase
Official Full Name
mitochondrial ribosomal protein L3provided by Xenbase
Primary source
Xenbase:XB-GENE-945435
See related
Ensembl:ENSXETG00000001845
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
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Genomic context

See mrpl3 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
10
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 6 NC_030682.2 (52143303..52193732, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 6 NC_030682.1 (72003984..72049580)

Chromosome 6 - NC_030682.2Genomic Context describing neighboring genes Neighboring gene asteroid homolog 1 Neighboring gene NIMA-related kinase 11 Neighboring gene copine IV Neighboring gene acid phosphatase 3

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of mitochondrial large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
large ribosomal subunit protein uL3m

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001016594.2NP_001016594.1  large ribosomal subunit protein uL3m

    See identical proteins and their annotated locations for NP_001016594.1

    Status: PROVISIONAL

    Source sequence(s)
    CR760592
    UniProtKB/TrEMBL
    A0A6I8RI69, A0A7D9NL86, Q28I48
    Related
    ENSXETP00000081328.2, ENSXETT00000103880.2
    Conserved Domains (1) summary
    pfam00297
    Location:50332
    Ribosomal_L3; Ribosomal protein L3

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    52143303..52193732 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)