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SS1G_02996 hypothetical protein [ Sclerotinia sclerotiorum 1980 UF-70 ]

Gene ID: 5493048, updated on 16-Nov-2023

Summary

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Gene symbol
SS1G_02996
Gene description
hypothetical protein
Locus tag
SS1G_02996
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Sclerotinia sclerotiorum 1980 UF-70 (strain: 1980)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Sclerotinia
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Genomic context

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See SS1G_02996 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
3

NW_001820833.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-conjugating enzyme E2 Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001820833.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001820833.1 Reference assembly

    Range
    2317572..2318962 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001596723.1 → XP_001596773.1  hypothetical protein SS1G_02996 [Sclerotinia sclerotiorum 1980 UF-70]

    See identical proteins and their annotated locations for XP_001596773.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1D9Q2D6, A7ECF7
    Conserved Domains (2) summary
    PLN02275
    Location:15 → 342
    PLN02275; transferase, transferring glycosyl groups
    cl10013
    Location:12 → 377
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...
Nucleotide Protein
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