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SS1G_11927 similar to laccase [ Sclerotinia sclerotiorum 1980 UF-70 ]

Gene ID: 5483056, updated on 16-Nov-2023

Summary

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Gene symbol
SS1G_11927
Gene description
similar to laccase
Locus tag
SS1G_11927
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Sclerotinia sclerotiorum 1980 UF-70 (strain: 1980)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Sclerotinia
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Genomic context

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See SS1G_11927 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
3

NW_001820816.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001820816.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
similar to laccase
Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001820816.1 Reference assembly

    Range
    560904..562982 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001586848.1 → XP_001586898.1  hypothetical protein SS1G_11927 [Sclerotinia sclerotiorum 1980 UF-70]

    See identical proteins and their annotated locations for XP_001586898.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1D9QHB0, A7F3T1
    Conserved Domains (4) summary
    cd13854
    Location:128 → 250
    CuRO_1_MaLCC_like; The first cupredoxin domain of the fungal laccases similar to Ma-LCC from Melanocarpus albomyces
    cd13880
    Location:261 → 424
    CuRO_2_MaLCC_like; The second cupredoxin domain of the fungal laccases similar to Ma-LCC from Melanocarpus albomyces
    cd13901
    Location:445 → 612
    CuRO_3_MaLCC_like; The third cupredoxin domain of the fungal laccases similar to Ma-LCC from Melanocarpus albomyces
    TIGR03388
    Location:130 → 618
    ascorbase; L-ascorbate oxidase, plant type
Nucleotide Protein
Heading Accession and Version

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