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LOC547969 ruBisCO-associated protein [ Glycine max (soybean) ]

Gene ID: 547969, updated on 7-Dec-2023

Summary

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Gene symbol
LOC547969
Gene description
ruBisCO-associated protein
Locus tag
GLYMA_01G142400v4
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC547969 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 1 NC_016088.4 (48658621..48659905)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 1 NC_016088.3 (47552220..47553504)

Chromosome 1 - NC_016088.4Genomic Context describing neighboring genes Neighboring gene probable inactive protein kinase DDB_G0270444 Neighboring gene uncharacterized LOC106794351 Neighboring gene protein transport Sec1a Neighboring gene ATP-dependent RNA helicase DEAH13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. cDNA sequence for the ribulose 1,5 bisphosphate carboxylase/oxygenase complex protein. A protein that accumulates in soybean leaves in response to fruit removal. Staswick PE, et al. Plant Physiol, 1994 Aug. PMID 7972504, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ruBisCO-associated protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001249828.1 → NP_001236757.1  ruBisCO-associated protein

    See identical proteins and their annotated locations for NP_001236757.1

    Status: PROVISIONAL

    Source sequence(s)
    L28804
    UniProtKB/Swiss-Prot
    P39657
    UniProtKB/TrEMBL
    A0A0R0LGD4
    Conserved Domains (1) summary
    cl10447
    Location:7 → 264
    GH18_chitinase-like; The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have ...

RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_016088.4 Reference Glycine_max_v4.0 Primary Assembly

    Range
    48658621..48659905
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P39657.1 GenPept UniProtKB/Swiss-Prot:P39657

Gene LinkOut

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