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PVX_084355 hypothetical protein, conserved [ Plasmodium vivax (malaria parasite P. vivax) ]

Gene ID: 5475846, updated on 5-Sep-2024

Summary

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Gene symbol
PVX_084355
Gene description
hypothetical protein, conserved
Locus tag
PVX_084355
See related
PlasmoDB:PVX_084355; VEuPathDB:PVX_084355
Gene type
protein coding
RNA name
hypothetical protein, conserved
RefSeq status
PROVISIONAL
Organism
Plasmodium vivax (strain: Salvador I)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium)
Orthologs
Plasmodium falciparum all
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Genomic context

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See PVX_084355 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
1
Sequence:
Chromosome: 13; NC_009918.1 (222463..223476)

Chromosome 13 - NC_009918.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 3 subunit 8, putative Neighboring gene hypothetical protein, conserved Neighboring gene hypothetical protein, conserved Neighboring gene DNA-directed RNA polymerase III subunit, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009918.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of the neglected human malaria parasite Plasmodium vivax. Carlton JM, et al. Nature, 2008 Oct 9. PMID 18843361, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Repeated regions

  • Loc: 222694-222778 rpt_type = tandem , rpt_unit_seq = cagcg , satellite = microsatellite
  • Loc: 222911-222965 rpt_type = tandem , rpt_unit_seq = tacg , satellite = microsatellite

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables thiosulfate sulfurtransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transsulfuration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein, conserved
XP_001616538.1
  • encoded by transcript PVX_084355A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009918.1 Reference assembly

    Range
    222463..223476
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001616488.1 → XP_001616538.1  hypothetical protein, conserved [Plasmodium vivax]

    See identical proteins and their annotated locations for XP_001616538.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0J9S6A2, A0A0J9T7A5, A0A0J9TQ32, A0A0J9VBQ6, A5K0G4
    Conserved Domains (1) summary
    cl00125
    Location:9 → 147
    RHOD; Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins ...
Nucleotide Protein
Heading Accession and Version

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