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PVX_117745 6-phosphogluconate dehydrogenase, decarboxylating, putative [ Plasmodium vivax (malaria parasite P. vivax) ]

Gene ID: 5475141, updated on 5-Sep-2024

Summary

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Gene symbol
PVX_117745
Gene description
6-phosphogluconate dehydrogenase, decarboxylating, putative
Locus tag
PVX_117745
See related
PlasmoDB:PVX_117745; VEuPathDB:PVX_117745
Gene type
protein coding
RNA name
6-phosphogluconate dehydrogenase, decarboxylating, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium vivax (strain: Salvador I)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium)
Orthologs
Plasmodium falciparum all
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Genomic context

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See PVX_117745 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
2
Sequence:
Chromosome: 12; NC_009917.1 (2109412..2111536, complement)

Chromosome 12 - NC_009917.1Genomic Context describing neighboring genes Neighboring gene Pv-fam-g protein Neighboring gene Pv-fam-g protein Neighboring gene ribosomal protein S11, putative Neighboring gene nifU protein, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009917.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of the neglected human malaria parasite Plasmodium vivax. Carlton JM, et al. Nature, 2008 Oct 9. PMID 18843361, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphogluconate dehydrogenase (decarboxylating) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in D-gluconate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt, oxidative branch IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
6-phosphogluconate dehydrogenase, decarboxylating, putative
XP_001615843.1
  • encoded by transcript PVX_117745A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009917.1 Reference assembly

    Range
    2109412..2111536 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001615793.1 → XP_001615843.1  6-phosphogluconate dehydrogenase, decarboxylating, putative [Plasmodium vivax]

    See identical proteins and their annotated locations for XP_001615843.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0J9S7Y4, A0A0J9SQJ4, A0A0J9T847, A0A0J9TSW0, A0A1G4H222, A0A564ZZF3, A5K3L2
    Conserved Domains (1) summary
    PTZ00142
    Location:4 → 473
    PTZ00142; 6-phosphogluconate dehydrogenase; Provisional
Nucleotide Protein
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