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GAPDH glyceraldehyde 3-phosphate dehydrogenase [ Glycine max (soybean) ]

Gene ID: 547514, updated on 7-Dec-2023

Summary

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Gene symbol
GAPDH
Gene description
glyceraldehyde 3-phosphate dehydrogenase
Locus tag
GLYMA_04G193500v4
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
Also known as
Gapds
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Genomic context

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See GAPDH in Genome Data Viewer
Location:
chromosome: 4
Exon count:
12
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 4 NC_016091.4 (45330698..45333607)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 4 NC_016091.3 (46511302..46514211)

Chromosome 4 - NC_016091.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100819303 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase Neighboring gene uncharacterized LOC100781705 Neighboring gene protein PLASTID TRANSCRIPTIONALLY ACTIVE 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glucose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glyceraldehyde-3-phosphate dehydrogenase
Names
glyceraldehyde-3-phosphate dehydrogenase, cytosolic
NP_001347984.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001361055.1 → NP_001347984.1  glyceraldehyde-3-phosphate dehydrogenase

    Status: VALIDATED

    Source sequence(s)
    ACUP04001586, GR833390, GR833391
    UniProtKB/TrEMBL
    A0A0R0KA84, Q07CZ3
    Conserved Domains (1) summary
    PLN02272
    Location:2 → 334
    PLN02272; glyceraldehyde-3-phosphate dehydrogenase

RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_016091.4 Reference Glycine_max_v4.0 Primary Assembly

    Range
    45330698..45333607
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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