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Gm5953 predicted gene 5953 [ Mus musculus (house mouse) ]

Gene ID: 546524, updated on 17-Aug-2024

Summary

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Official Symbol
Gm5953provided by MGI
Official Full Name
predicted gene 5953provided by MGI
Primary source
MGI:MGI:3647171
See related
AllianceGenome:MGI:3647171
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EG546524
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Genomic context

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See Gm5953 in Genome Data Viewer
Location:
12 A1.2; 12 8.21 cM
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (19338489..19368134)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (19288488..19308239)

Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 53775 Neighboring gene STARR-seq mESC enhancer starr_31692 Neighboring gene predicted gene, 40843 Neighboring gene predicted gene, 51522 Neighboring gene STARR-seq mESC enhancer starr_31694 Neighboring gene hippocalcin-like 1 pseudogene Neighboring gene predicted gene 5784

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000078.7 Reference GRCm39 C57BL/6J

    Range
    19338489..19368134
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004937697.1 RNA Sequence

  2. XR_004937700.1 RNA Sequence

  3. XR_004937699.1 RNA Sequence

  4. XR_004937695.1 RNA Sequence

  5. XR_004937693.1 RNA Sequence

  6. XR_003950288.2 RNA Sequence

  7. XR_004937692.1 RNA Sequence

  8. XR_004937694.1 RNA Sequence

  9. XR_004937698.1 RNA Sequence

  10. XR_003950287.2 RNA Sequence

  11. XR_004937696.1 RNA Sequence

Nucleotide Protein Strain
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Gene LinkOut

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