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SPAR_D01420 Pmt5 [ Saccharomyces paradoxus ]

Gene ID: 54629389, updated on 17-May-2024

Summary

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Gene symbol
SPAR_D01420
Gene description
Pmt5
Locus tag
SPAR_D01420
See related
FungiDB:SPAR_D01420; VEuPathDB:SPAR_D01420
Gene type
protein coding
RNA name
Pmt5
RefSeq status
PROVISIONAL
Organism
Saccharomyces paradoxus (strain: CBS432, type-material: culture from neotype of Saccharomyces paradoxus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
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Genomic context

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See SPAR_D01420 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
1
Sequence:
Chromosome: IV; NC_047490.1 (291081..293309)

Chromosome IV - NC_047490.1Genomic Context describing neighboring genes Neighboring gene Rpn6 Neighboring gene Pmt1 Neighboring gene Srp14 Neighboring gene Ubx3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047490.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Contrasting evolutionary genome dynamics between domesticated and wild yeasts. Yue JX, et al. Nat Genet, 2017 Jun. PMID 28416820, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate-mannose-protein mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Pmt5
XP_033765175.1
  • Protein O-mannosyltransferase
    similar to YDL093W

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_047490.1 Reference assembly

    Range
    291081..293309
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033909284.1 → XP_033765175.1  Pmt5 [Saccharomyces paradoxus]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8B8UN15
    Conserved Domains (1) summary
    COG1928
    Location:22 → 729
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
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