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SPAR_B01720 Tat1 [ Saccharomyces paradoxus ]

Gene ID: 54628856, updated on 17-May-2024

Summary

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Gene symbol
SPAR_B01720
Gene description
Tat1
Locus tag
SPAR_B01720
See related
FungiDB:SPAR_B01720; VEuPathDB:SPAR_B01720
Gene type
protein coding
RNA name
Tat1
RefSeq status
PROVISIONAL
Organism
Saccharomyces paradoxus (strain: CBS432, type-material: culture from neotype of Saccharomyces paradoxus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
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Genomic context

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See SPAR_B01720 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_047488.1 (386782..388650, complement)

Chromosome II - NC_047488.1Genomic Context describing neighboring genes Neighboring gene Tip1 Neighboring gene Bap2 Neighboring gene Alg14 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047488.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Contrasting evolutionary genome dynamics between domesticated and wild yeasts. Yue JX, et al. Nat Genet, 2017 Jun. PMID 28416820, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables amino acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in amino acid transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Tat1
XP_033764665.1
  • Amino acid transporter for valine, leucine, isoleucine, and tyrosine
    similar to YBR069C

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_047488.1 Reference assembly

    Range
    386782..388650 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033908774.1 → XP_033764665.1  Tat1 [Saccharomyces paradoxus]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8B8ULI8
    Conserved Domains (1) summary
    TIGR00913
    Location:94 → 569
    2A0310; amino acid permease (yeast)
Nucleotide Protein
Heading Accession and Version

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