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lncRNA:CR46480 long non-coding RNA:CR46480 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 54520518, updated on 29-Dec-2023

Summary

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Official Symbol
lncRNA:CR46480provided by FlyBase
Official Full Name
long non-coding RNA:CR46480provided by FlyBase
Primary source
FLYBASE:FBgn0287611
Locus tag
Dmel_CR46480
See related
AllianceGenome:FB:FBgn0287611
Gene type
ncRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CR46480; Dmel\CR46480; XLOC_004237
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Genomic context

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See lncRNA:CR46480 in Genome Data Viewer
Location:
40E4-40E4; 2-54 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (22115437..22121183, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Cyclin K Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NT_033779.5 Chromosome 2L Reference Release 6 plus ISO1 MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Non-coding RNA Expression, Function, and Variation during Drosophila Embryogenesis. Schor IE, et al. Curr Biol, 2018 Nov 19. PMID 30393032, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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mobile_element

  • Loc: c22115684-22115445 mobile_element_type = transposon:INE-1{}2311
  • Loc: c22117150-22115681 mobile_element_type = transposon:HB{}529

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    22115437..22121183 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_167867.1 RNA Sequence

    Status: REVIEWED

  2. NR_167868.1 RNA Sequence

    Status: REVIEWED