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lncRNA:CR46475 long non-coding RNA:CR46475 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 54520513, updated on 29-Dec-2023

Summary

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Official Symbol
lncRNA:CR46475provided by FlyBase
Official Full Name
long non-coding RNA:CR46475provided by FlyBase
Primary source
FLYBASE:FBgn0287606
Locus tag
Dmel_CR46475
See related
AllianceGenome:FB:FBgn0287606
Gene type
ncRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CR46475; Dmel\CR46475; XLOC_013547
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Genomic context

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See lncRNA:CR46475 in Genome Data Viewer
Location:
80E2-80E3; 3-47 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (23266134..23279170, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR43967 Neighboring gene long non-coding RNA:CR45735 Neighboring gene uncharacterized protein Neighboring gene nicotinic Acetylcholine Receptor alpha4 Neighboring gene alpha Catenin Neighboring gene mir-4942 stem loop Neighboring gene NADH dehydrogenase (ubiquinone) MLRQ subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NT_037436.4 Chromosome 3L Reference Release 6 plus ISO1 MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Non-coding RNA Expression, Function, and Variation during Drosophila Embryogenesis. Schor IE, et al. Curr Biol, 2018 Nov 19. PMID 30393032, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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mobile_element

  • Loc: c23268895-23268579 mobile_element_type = transposon:297{}4622
  • Loc: c23269363-23269225 mobile_element_type = transposon:INE-1{}4522

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    23266134..23279170 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_167859.1 RNA Sequence

    Status: REVIEWED

  2. NR_167860.1 RNA Sequence

    Status: REVIEWED

  3. NR_167861.1 RNA Sequence

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version