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HCAG_08842 chitin synthase 2 [ Histoplasma mississippiense (nom. inval.) ]

Gene ID: 5442605, updated on 31-Oct-2024

Summary

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Gene symbol
HCAG_08842
Gene description
chitin synthase 2
Locus tag
HCAG_08842
See related
FungiDB:HCAG_08842; VEuPathDB:HCAG_08842
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Histoplasma mississippiense (nom. inval.) (strain: NAm1)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Ajellomycetaceae; Histoplasma; unclassified Histoplasma
Orthologs
Aspergillus fumigatus all
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Genomic context

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See HCAG_08842 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
6

NW_001813970.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene low molecular weight phosphotyrosine protein phosphatase Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001813970.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chitin synthase 2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001813970.1 Reference assembly

    Range
    83875..87422 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001536128.1 → XP_001536178.1  chitin synthase 2 [Histoplasma mississippiense (nom. inval.)]

    See identical proteins and their annotated locations for XP_001536178.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A6RGS5
    Conserved Domains (5) summary
    COG1215
    Location:367 → 699
    BcsA; Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility]
    pfam01644
    Location:256 → 418
    Chitin_synth_1; Chitin synthase
    pfam08407
    Location:181 → 254
    Chitin_synth_1N; Chitin synthase N-terminal
    cl09326
    Location:593 → 764
    MATE_like; Multidrug and toxic compound extrusion family and similar proteins
    cl11394
    Location:398 → 614
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Protein Accession Links
GenPept Link UniProtKB Link
EDN05192.1

Gene LinkOut

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Molecular Biology Databases
Research Materials