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BCIN_06g00460 hypothetical protein [ Botrytis cinerea B05.10 ]

Gene ID: 5440846, updated on 21-Dec-2023

Summary

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Gene symbol
BCIN_06g00460
Gene description
hypothetical protein
Locus tag
BCIN_06g00460
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Botrytis cinerea B05.10 (strain: B05.10)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Botrytis
Old locus tag
BC1G_01004
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Genomic context

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See BCIN_06g00460 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
11
Sequence:
Chromosome: 6; NC_037315.1 (210875..214453, complement)

Chromosome 6 - NC_037315.1Genomic Context describing neighboring genes Neighboring gene Bccac2 Neighboring gene Bhl1 Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037315.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A gapless genome sequence of the fungus Botrytis cinerea. Van Kan JA, et al. Mol Plant Pathol, 2017 Jan. PMID 26913498, Free PMC Article
  2. Genome update of Botrytis cinerea strains B05.10 and T4. Staats M, et al. Eukaryot Cell, 2012 Nov. PMID 23104368, Free PMC Article
  3. Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea. Amselem J, et al. PLoS Genet, 2011 Aug. PMID 21876677, Free PMC Article
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_037315.1 Reference assembly

    Range
    210875..214453 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024693296.1 → XP_024549082.1  hypothetical protein BCIN_06g00460 [Botrytis cinerea B05.10]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A384JIX8, G2Y9L7, M7TL44
    Conserved Domains (2) summary
    cd03784
    Location:80 → 504
    GT1_Gtf_like; This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the ...
    cl25572
    Location:686 → 757
    VPS13; Vacuolar sorting-associated protein 13, N-terminal
Nucleotide Protein
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