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FRK2 fructokinase [ Solanum lycopersicum (tomato) ]

Gene ID: 544022, updated on 9-Nov-2023

Summary

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Gene symbol
FRK2
Gene description
fructokinase
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Solanum lycopersicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
Also known as
FK
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Genomic context

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See FRK2 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
4
Annotation release Status Assembly Chr Location
103 current SL3.0 (GCF_000188115.4) 6 NC_015443.3 (45234864..45237513, complement)
102 previous assembly SL2.50 (GCF_000188115.3) 6 NC_015443.2 (45093404..45096053, complement)

Chromosome 6 - NC_015443.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101255409 Neighboring gene CONSTANS interacting protein 1 Neighboring gene protein FAR1-RELATED SEQUENCE 5 Neighboring gene protein FAR1-RELATED SEQUENCE 2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. LeFRK2 is required for phloem and xylem differentiation and the transport of both sugar and water. Damari-Weissler H, et al. Planta, 2009 Sep. PMID 19633866
  2. The tomato plastidic fructokinase SlFRK3 plays a role in xylem development. Stein O, et al. New Phytol, 2016 Mar. PMID 26467542
  3. Divergent fructokinase genes are differentially expressed in tomato. Kanayama Y, et al. Plant Physiol, 1997 Apr. PMID 9112782, Free PMC Article
  4. Large-scale analysis of full-length cDNAs from the tomato (Solanum lycopersicum) cultivar Micro-Tom, a reference system for the Solanaceae genomics. Aoki K, et al. BMC Genomics, 2010 Mar 30. PMID 20350329, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fructokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fructose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fructokinase-2
NP_001233888.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001246959.2 → NP_001233888.1  fructokinase-2

    See identical proteins and their annotated locations for NP_001233888.1

    Status: VALIDATED

    Source sequence(s)
    AK326357, U64818
    UniProtKB/Swiss-Prot
    O04994, Q42896
    Conserved Domains (1) summary
    PLN02323
    Location:1 → 328
    PLN02323; probable fructokinase

RefSeqs of Annotated Genomes: Solanum lycopersicum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SL3.0 Primary Assembly

Genomic

  1. NC_015443.3 Reference SL3.0 Primary Assembly

    Range
    45234864..45237513 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q42896.2 GenPept UniProtKB/Swiss-Prot:Q42896

Gene LinkOut

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Molecular Biology Databases
Research Materials