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BCIN_11g04000 hypothetical protein [ Botrytis cinerea B05.10 ]

Gene ID: 5439165, updated on 21-Dec-2023

Summary

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Gene symbol
BCIN_11g04000
Gene description
hypothetical protein
Locus tag
BCIN_11g04000
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Botrytis cinerea B05.10 (strain: B05.10)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Botrytis
Old locus tag
BC1G_03396
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Genomic context

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See BCIN_11g04000 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
2
Sequence:
Chromosome: 11; NC_037320.1 (1497127..1500852)

Chromosome 11 - NC_037320.1Genomic Context describing neighboring genes Neighboring gene Bctvp18 Neighboring gene hypothetical protein Neighboring gene Bcmcm10 Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037320.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A gapless genome sequence of the fungus Botrytis cinerea. Van Kan JA, et al. Mol Plant Pathol, 2017 Jan. PMID 26913498, Free PMC Article
  2. Genome update of Botrytis cinerea strains B05.10 and T4. Staats M, et al. Eukaryot Cell, 2012 Nov. PMID 23104368, Free PMC Article
  3. Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea. Amselem J, et al. PLoS Genet, 2011 Aug. PMID 21876677, Free PMC Article
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha,alpha-trehalase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in fungal-type cell wall IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_037320.1 Reference assembly

    Range
    1497127..1500852
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001558497.2 → XP_001558547.2  hypothetical protein BCIN_11g04000 [Botrytis cinerea B05.10]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A384JX16
    Conserved Domains (1) summary
    cl27850
    Location:95 → 561
    Glyco_hydro_65m; Glycosyl hydrolase family 65 central catalytic domain
Nucleotide Protein
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