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LOC542972 sucrose synthase 2 [ Triticum aestivum (bread wheat) ]

Gene ID: 542972, updated on 30-Nov-2023

Summary

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Gene symbol
LOC542972
Gene description
sucrose synthase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Triticum aestivum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Genomic context

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See LOC542972 in Genome Data Viewer
Location:
chromosome: 2B
Exon count:
18
Annotation release Status Assembly Chr Location
100 current IWGSC CS RefSeq v2.1 (GCF_018294505.1) 2B NC_057798.1 (179143649..179149730, complement)

Chromosome 2B - NC_057798.1Genomic Context describing neighboring genes Neighboring gene dirigent protein 1-like Neighboring gene uncharacterized LOC123044206 Neighboring gene 40S ribosomal protein Sa-2-like Neighboring gene DNA-directed RNA polymerases II, IV and V subunit 6A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057798.1 Chromosome 2B Reference IWGSC CS RefSeq v2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Linked sucrose synthase genes in group-7 chromosomes in hexaploid wheat (Triticum aestivum L.). Maraña C, et al. Gene, 1988 Mar 31. PMID 2838390
  2. Comparative Temporal Transcriptome Profiling of Wheat near Isogenic Line Carrying Lr57 under Compatible and Incompatible Interactions. Yadav IS, et al. Front Plant Sci, 2016. PMID 28066494, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sucrose synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sucrose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sucrose synthase 2
Names
sucrose synthase type 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Triticum aestivum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IWGSC CS RefSeq v2.1 Primary Assembly

Genomic

  1. NC_057798.1 Reference IWGSC CS RefSeq v2.1 Primary Assembly

    Range
    179143649..179149730 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044466877.1 → XP_044322812.1  sucrose synthase 2 isoform X2

    UniProtKB/TrEMBL
    Q43223
    Conserved Domains (1) summary
    PLN00142
    Location:4 → 812
    PLN00142; sucrose synthase

  2. XM_044466878.1 → XP_044322813.1  sucrose synthase 2 isoform X2

    UniProtKB/TrEMBL
    Q43223
    Conserved Domains (1) summary
    PLN00142
    Location:4 → 812
    PLN00142; sucrose synthase

  3. XM_044466876.1 → XP_044322811.1  sucrose synthase 2 isoform X1

    UniProtKB/TrEMBL
    A0A3B6AUT2, A0A3B6C2G3
    Conserved Domains (1) summary
    PLN00142
    Location:19 → 827
    PLN00142; sucrose synthase
Nucleotide Protein
Heading Accession and Version

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