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Bcgas1 Bcgas1 [ Botrytis cinerea B05.10 ]

Gene ID: 5427876, updated on 21-Dec-2023

Summary

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Gene symbol
Bcgas1
Gene description
Bcgas1
Locus tag
BCIN_02g06940
Gene type
protein coding
RNA name
Bcgas1
RefSeq status
PROVISIONAL
Organism
Botrytis cinerea B05.10 (strain: B05.10)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Botrytis
Old locus tag
BC1G_14030
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Genomic context

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See Bcgas1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
4
Sequence:
Chromosome: 2; NC_037311.1 (2458010..2460944)

Chromosome 2 - NC_037311.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene Bcotu1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037311.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A gapless genome sequence of the fungus Botrytis cinerea. Van Kan JA, et al. Mol Plant Pathol, 2017 Jan. PMID 26913498, Free PMC Article
  2. Genome update of Botrytis cinerea strains B05.10 and T4. Staats M, et al. Eukaryot Cell, 2012 Nov. PMID 23104368, Free PMC Article
  3. Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea. Amselem J, et al. PLoS Genet, 2011 Aug. PMID 21876677, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-glucanosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fungal-type cell wall (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in fungal-type cell wall IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Bcgas1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_037311.1 Reference assembly

    Range
    2458010..2460944
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001547353.2 → XP_001547403.1  Bcgas1 [Botrytis cinerea B05.10]

    See identical proteins and their annotated locations for XP_001547403.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A384JA21, G2YBF1, M7TJF2
    Conserved Domains (2) summary
    pfam07983
    Location:381 → 457
    X8; X8 domain
    cl23725
    Location:27 → 332
    Glyco_hydro_1; Glycosyl hydrolase family 1
Nucleotide Protein
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