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LOC542247 sucrose synthase 1 [ Zea mays ]

Gene ID: 542247, updated on 14-Dec-2023

Summary

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Gene symbol
LOC542247
Gene description
sucrose synthase 1
Locus tag
ZEAMMB73_Zm00001d047253
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Zea mays
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Also known as
ss2; sus1; GRMZM2G152908
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Genomic context

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See LOC542247 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
16
Annotation release Status Assembly Chr Location
103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 9 NC_050104.1 (127808736..127815603, complement)
102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 9 NC_024467.2 (124178281..124184886, complement)

Chromosome 9 - NC_050104.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 3 subunit pseudogene Neighboring gene uncharacterized LOC100192837 Neighboring gene uncharacterized LOC100383498 Neighboring gene serine/threonine-protein kinase EDR1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The three maize sucrose synthase isoforms differ in distribution, localization, and phosphorylation. Duncan KA, et al. Plant Cell Physiol, 2006 Jul. PMID 16760218
  2. Phosphorylation of serine-15 of maize leaf sucrose synthase. Occurrence in vivo and possible regulatory significance. Huber SC, et al. Plant Physiol, 1996 Oct. PMID 8883390, Free PMC Article
  3. Complete nucleotide sequence of the maize (Zea mays L.) sucrose synthase 2 cDNA. Huang XF, et al. Plant Physiol, 1994 Jan. PMID 8115551, Free PMC Article
  4. Structural features of the maize sus1 gene and protein. Shaw JR, et al. Plant Physiol, 1994 Dec. PMID 7846165, Free PMC Article
  5. Isolation and analysis of water stress induced genes in maize seedlings by subtractive PCR and cDNA macroarray. Zheng J, et al. Plant Mol Biol, 2004 Aug. PMID 15604718

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sucrose synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sucrose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sucrose synthase 2
Names
UDP-glucose:D-fructose 2-glucosyl-transferase
NP_001105323.1
XP_008659017.1
XP_008659018.1
XP_020399432.1
XP_023156776.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001111853.1 → NP_001105323.1  sucrose synthase 2

    See identical proteins and their annotated locations for NP_001105323.1

    Status: PROVISIONAL

    Source sequence(s)
    L22296
    UniProtKB/Swiss-Prot
    P49036
    UniProtKB/TrEMBL
    A0A097C0T5, A0A3L6DF72, Q43706
    Conserved Domains (1) summary
    PLN00142
    Location:4 → 816
    PLN00142; sucrose synthase

RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

Genomic

  1. NC_050104.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Range
    127808736..127815603 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008660795.4 → XP_008659017.1  sucrose synthase 2 isoform X1

    See identical proteins and their annotated locations for XP_008659017.1

    UniProtKB/TrEMBL
    C0P6F8, Q43706
    Conserved Domains (1) summary
    PLN00142
    Location:4 → 816
    PLN00142; sucrose synthase

  2. XM_020543843.3 → XP_020399432.1  sucrose synthase 2 isoform X1

    UniProtKB/TrEMBL
    C0P6F8, Q43706
    Conserved Domains (1) summary
    PLN00142
    Location:4 → 816
    PLN00142; sucrose synthase

  3. XM_008660796.4 → XP_008659018.1  sucrose synthase 2 isoform X1

    See identical proteins and their annotated locations for XP_008659018.1

    UniProtKB/TrEMBL
    C0P6F8, Q43706
    Conserved Domains (1) summary
    PLN00142
    Location:4 → 816
    PLN00142; sucrose synthase

  4. XM_023301008.2 → XP_023156776.1  sucrose synthase 2 isoform X1

    UniProtKB/TrEMBL
    C0P6F8, Q43706
    Conserved Domains (1) summary
    PLN00142
    Location:4 → 816
    PLN00142; sucrose synthase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P49036.1 GenPept UniProtKB/Swiss-Prot:P49036

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