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SCG1 phosphoglycan beta 1,3 galactosyltransferase 1 [ Leishmania braziliensis MHOM/BR/75/M2904 ]

Gene ID: 5412899, updated on 28-Dec-2023

Summary

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Gene symbol
SCG1
Gene description
phosphoglycan beta 1,3 galactosyltransferase 1
Locus tag
LBRM_07_0240
Gene type
protein coding
RNA name
phosphoglycan beta 1,3 galactosyltransferase 1
RefSeq status
PROVISIONAL
Organism
Leishmania braziliensis MHOM/BR/75/M2904 (strain: MHOM/BR/75/M2904)
Lineage
Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania braziliensis species complex
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Genomic context

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Location:
chromosome: 7
Exon count:
1
Sequence:
Chromosome: 7; NC_009299.2 (87005..89446)

Chromosome 7 - NC_009299.2Genomic Context describing neighboring genes Neighboring gene conserved hypothetical protein Neighboring gene conserved hypothetical protein Neighboring gene conserved hypothetical protein Neighboring gene putative protein kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009299.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomic analysis of three Leishmania species that cause diverse human disease. Peacock CS, et al. Nat Genet, 2007 Jul. PMID 17572675, Free PMC Article
  2. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
phosphoglycan beta 1,3 galactosyltransferase 1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009299.2 Reference assembly

    Range
    87005..89446
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001562470.2 → XP_001562520.2  phosphoglycan beta 1,3 galactosyltransferase 1 [Leishmania braziliensis MHOM/BR/75/M2904]

    See identical proteins and their annotated locations for XP_001562520.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A3P3ZHT1, A4H4W8
    Conserved Domains (1) summary
    cl21608
    Location:300 → 662
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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