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GLRA3 glycine receptor alpha 3 [ Bos taurus (domestic cattle) ]

Gene ID: 541160, updated on 4-Oct-2024

Summary

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Official Symbol
GLRA3provided by VGNC
Official Full Name
glycine receptor alpha 3provided by VGNC
Primary source
VGNC:VGNC:56969
See related
BGD:BT13978; Ensembl:ENSBTAG00000019732
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See GLRA3 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 8 NC_037335.1 (6957328..7165437, complement)

Chromosome 8 - NC_037335.1Genomic Context describing neighboring genes Neighboring gene U1 spliceosomal RNA Neighboring gene 15-hydroxyprostaglandin dehydrogenase Neighboring gene ADAM metallopeptidase domain 29 Neighboring gene disintegrin and metalloproteinase domain-containing protein 20

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037335.1 Chromosome 8 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. High-resolution comparative mapping between human chromosomes 4 and 8 and bovine chromosome 27 provides genes and segments serving as positional candidates for udder health in cattle. Goldammer T, et al. Genomics, 2004 Oct. PMID 15475247
  2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellularly glycine-gated chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmitter-gated monoatomic ion channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycine receptor subunit alpha-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037335.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    6957328..7165437 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024996385.2 → XP_024852153.1  glycine receptor subunit alpha-3 isoform X2

    UniProtKB/TrEMBL
    A0A3Q1M2G1
    Conserved Domains (1) summary
    TIGR00860
    Location:12 → 436
    LIC; Cation transporter family protein

  2. XM_024996384.2 → XP_024852152.1  glycine receptor subunit alpha-3 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1NEK7
    Related
    ENSBTAP00000070066.2, ENSBTAT00000076019.2
    Conserved Domains (1) summary
    TIGR00860
    Location:12 → 451
    LIC; Cation transporter family protein
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases
Research Materials