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PCED1B PC-esterase domain containing 1B [ Bos taurus (domestic cattle) ]

Gene ID: 540367, updated on 4-Oct-2024

Summary

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Official Symbol
PCED1Bprovided by VGNC
Official Full Name
PC-esterase domain containing 1Bprovided by VGNC
Primary source
VGNC:VGNC:32624
See related
BGD:BT18119; Ensembl:ENSBTAG00000011838
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
FAM113B
Orthologs
human mouse all
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Genomic context

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See PCED1B in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (33019759..33169810, complement)

Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene dnaJ homolog subfamily C member 28-like Neighboring gene uncharacterized LOC112446684 Neighboring gene large ribosomal subunit protein eL37-like Neighboring gene uncharacterized LOC100847695 Neighboring gene adhesion molecule with Ig like domain 2 Neighboring gene uncharacterized LOC112446608 Neighboring gene solute carrier family 38 member 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
PC-esterase domain-containing protein 1B
Names
Protein FAM113B
family with sequence similarity 113, member B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001101207.2 → NP_001094677.1  PC-esterase domain-containing protein 1B

    See identical proteins and their annotated locations for NP_001094677.1

    Status: PROVISIONAL

    Source sequence(s)
    BC147859
    UniProtKB/Swiss-Prot
    A6QL70
    UniProtKB/TrEMBL
    A0A3Q1MC51
    Related
    ENSBTAP00000083586.1, ENSBTAT00000128447.1
    Conserved Domains (1) summary
    cl01053
    Location:17 → 249
    SGNH_hydrolase; SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely ...

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    33019759..33169810 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005206403.5 → XP_005206460.1  PC-esterase domain-containing protein 1B isoform X1

    See identical proteins and their annotated locations for XP_005206460.1

    UniProtKB/Swiss-Prot
    A6QL70
    UniProtKB/TrEMBL
    A0A3Q1MC51
    Related
    ENSBTAP00000068375.2, ENSBTAT00000066673.2
    Conserved Domains (1) summary
    cl01053
    Location:17 → 249
    SGNH_hydrolase; SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely ...

  2. XM_024992042.2 → XP_024847810.1  PC-esterase domain-containing protein 1B isoform X1

    UniProtKB/Swiss-Prot
    A6QL70
    UniProtKB/TrEMBL
    A0A3Q1MC51
    Related
    ENSBTAP00000081431.1, ENSBTAT00000124615.1
    Conserved Domains (1) summary
    cl01053
    Location:17 → 249
    SGNH_hydrolase; SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely ...
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A6QL70.1 GenPept UniProtKB/Swiss-Prot:A6QL70

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