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RIPOR2 RHO family interacting cell polarization regulator 2 [ Bos taurus (domestic cattle) ]

Gene ID: 539635, updated on 10-Oct-2024

Summary

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Official Symbol
RIPOR2provided by VGNC
Official Full Name
RHO family interacting cell polarization regulator 2provided by VGNC
Primary source
VGNC:VGNC:54232
See related
BGD:BT21516; Ensembl:ENSBTAG00000018165
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
FAM65B
Orthologs
human mouse all
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Genomic context

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See RIPOR2 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
29
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 23 NC_037350.1 (32786760..32998335)

Chromosome 23 - NC_037350.1Genomic Context describing neighboring genes Neighboring gene vesicle-associated membrane protein-associated protein B-like Neighboring gene cytidine monophospho-N-acetylneuraminic acid hydroxylase Neighboring gene uncharacterized LOC132343637 Neighboring gene U6 spliceosomal RNA Neighboring gene armadillo like helical domain containing 2 Neighboring gene geminin DNA replication inhibitor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037350.1 Chromosome 23 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • MGC128480

General protein information

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Preferred Names
rho family-interacting cell polarization regulator 2
Names
family with sequence similarity 65 member B
protein FAM65B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001035425.1 → NP_001030502.1  rho family-interacting cell polarization regulator 2

    See identical proteins and their annotated locations for NP_001030502.1

    Status: PROVISIONAL

    Source sequence(s)
    BC107544
    UniProtKB/Swiss-Prot
    Q3B7M3
    UniProtKB/TrEMBL
    A0A3Q1MJ41
    Related
    ENSBTAP00000069209.2, ENSBTAT00000082792.2
    Conserved Domains (2) summary
    pfam15903
    Location:16 → 362
    PL48; Filopodia upregulated, FAM65
    sd00044
    Location:926 → 953
    HEAT; HEAT repeat [structural motif]

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037350.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    32786760..32998335
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059880414.1 → XP_059736397.1  rho family-interacting cell polarization regulator 2 isoform X7

  2. XM_005223782.5 → XP_005223839.1  rho family-interacting cell polarization regulator 2 isoform X5

    Conserved Domains (1) summary
    pfam15903
    Location:50 → 396
    PL48; Filopodia upregulated, FAM65

  3. XM_005223781.5 → XP_005223838.1  rho family-interacting cell polarization regulator 2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1ME02, A0A3Q1MJ41
    Related
    ENSBTAP00000072378.2, ENSBTAT00000072703.2
    Conserved Domains (2) summary
    pfam15903
    Location:50 → 396
    PL48; Filopodia upregulated, FAM65
    sd00044
    Location:960 → 987
    HEAT; HEAT repeat [structural motif]

  4. XM_010818489.4 → XP_010816791.1  rho family-interacting cell polarization regulator 2 isoform X2

    UniProtKB/TrEMBL
    A0A3Q1MJ41, F1MEE9
    Related
    ENSBTAP00000024178.4, ENSBTAT00000024178.5
    Conserved Domains (2) summary
    pfam15903
    Location:45 → 391
    PL48; Filopodia upregulated, FAM65
    sd00044
    Location:955 → 982
    HEAT; HEAT repeat [structural motif]

  5. XM_024983689.2 → XP_024839457.1  rho family-interacting cell polarization regulator 2 isoform X6

    Conserved Domains (1) summary
    pfam15903
    Location:45 → 391
    PL48; Filopodia upregulated, FAM65

  6. XM_024983687.2 → XP_024839455.1  rho family-interacting cell polarization regulator 2 isoform X3

    UniProtKB/TrEMBL
    A0A3Q1MJ41
    Conserved Domains (1) summary
    pfam15903
    Location:16 → 362
    PL48; Filopodia upregulated, FAM65

  7. XM_059880411.1 → XP_059736394.1  rho family-interacting cell polarization regulator 2 isoform X3

  8. XM_059880413.1 → XP_059736396.1  rho family-interacting cell polarization regulator 2 isoform X4

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q3B7M3.1 GenPept UniProtKB/Swiss-Prot:Q3B7M3

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