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FKBP6 FKBP prolyl isomerase family member 6 (inactive) [ Bos taurus (domestic cattle) ]

Gene ID: 537921, updated on 10-Oct-2024

Summary

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Official Symbol
FKBP6provided by VGNC
Official Full Name
FKBP prolyl isomerase family member 6 (inactive)provided by VGNC
Primary source
VGNC:VGNC:29025
See related
BGD:BT24477; Ensembl:ENSBTAG00000002253
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
FKBP-6
Orthologs
human mouse all
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Genomic context

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See FKBP6 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 25 NC_037352.1 (33771779..33800968, complement)

Chromosome 25 - NC_037352.1Genomic Context describing neighboring genes Neighboring gene bromodomain adjacent to zinc finger domain 1B Neighboring gene uncharacterized LOC132343870 Neighboring gene frizzled class receptor 9 Neighboring gene tripartite motif containing 50 Neighboring gene NOP2/Sun RNA methyltransferase 5 Neighboring gene POM121 transmembrane nucleoporin C

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037352.1 Chromosome 25 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Differential DNA methylation of the meiosis-specific gene FKBP6 in testes of yak and cattle-yak hybrids. Li B, et al. Reprod Domest Anim, 2016 Dec. PMID 27658575
  2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC152367

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-prolyl cis-trans isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inactive peptidyl-prolyl cis-trans isomerase FKBP6
Names
36 kDa FK506-binding protein
FK506 binding protein 6, 36kDa
FK506-binding protein 6
FKBP prolyl isomerase 6
PPIase FKBP6
immunophilin FKBP36
inactive PPIase FKBP6
peptidyl-prolyl cis-trans isomerase FKBP6
rotamase
NP_001095679.1
XP_005225237.1
XP_024840767.1
XP_059737378.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001102209.1 → NP_001095679.1  inactive peptidyl-prolyl cis-trans isomerase FKBP6

    See identical proteins and their annotated locations for NP_001095679.1

    Status: PROVISIONAL

    Source sequence(s)
    BC149679
    UniProtKB/Swiss-Prot
    A6QQ71
    UniProtKB/TrEMBL
    A0AAA9SDE8
    Conserved Domains (4) summary
    sd00006
    Location:203 → 247
    TPR; TPR repeat [structural motif]
    pfam00254
    Location:48 → 139
    FKBP_C; FKBP-type peptidyl-prolyl cis-trans isomerase
    pfam13414
    Location:219 → 283
    TPR_11; TPR repeat
    pfam13424
    Location:169 → 250
    TPR_12; Tetratricopeptide repeat

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037352.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    33771779..33800968 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024984999.2 → XP_024840767.1  inactive peptidyl-prolyl cis-trans isomerase FKBP6 isoform X1

    UniProtKB/TrEMBL
    A0AAA9SDE8, A0AAF6YJC8
    Conserved Domains (3) summary
    COG0457
    Location:164 → 315
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:204 → 248
    TPR; TPR repeat [structural motif]
    pfam00254
    Location:49 → 140
    FKBP_C; FKBP-type peptidyl-prolyl cis-trans isomerase

  2. XM_005225180.3 → XP_005225237.1  inactive peptidyl-prolyl cis-trans isomerase FKBP6 isoform X1

    See identical proteins and their annotated locations for XP_005225237.1

    UniProtKB/TrEMBL
    A0AAA9SDE8, A0AAF6YJC8
    Related
    ENSBTAP00000002909.5, ENSBTAT00000002909.6
    Conserved Domains (3) summary
    COG0457
    Location:164 → 315
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:204 → 248
    TPR; TPR repeat [structural motif]
    pfam00254
    Location:49 → 140
    FKBP_C; FKBP-type peptidyl-prolyl cis-trans isomerase

  3. XM_059881395.1 → XP_059737378.1  inactive peptidyl-prolyl cis-trans isomerase FKBP6 isoform X1

    UniProtKB/TrEMBL
    A0AAF6YJC8
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A6QQ71.1 GenPept UniProtKB/Swiss-Prot:A6QQ71

Gene LinkOut

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Research Materials