MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 [Bos taurus (domestic cattle)] - Gene

Summary

Official Symbol: MDGA1provided by VGNC
Official Full Name: MAM domain containing glycosylphosphatidylinositol anchor 1provided by VGNC
Primary source: VGNC:VGNC:31331
See related: BGD:BT15561; Ensembl:ENSBTAG00000005888
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Bos taurus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 23

Exon count:: 17

Annotation release	Status	Assembly	Chr	Location
RS_2023_09	current	ARS-UCD2.0 (GCF_002263795.3)	23	NC_037350.1 (11546127..11611238, complement)

Chromosome 23 - NC_037350.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_037350.1 Chromosome 23 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables axon guidance receptor activity	IEA Inferred from Electronic Annotation more info	PubMed
enables protein binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules	IEA Inferred from Electronic Annotation more info	PubMed
involved_in synapse organization	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in axon	IEA Inferred from Electronic Annotation more info	PubMed
located_in neuronal cell body	IEA Inferred from Electronic Annotation more info	PubMed
located_in plasma membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: MAM domain-containing glycosylphosphatidylinositol anchor protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001192882.2 → NP_001179811.1 MAM domain-containing glycosylphosphatidylinositol anchor protein 1 precursor

See identical proteins and their annotated locations for NP_001179811.1

Status: PROVISIONAL

Source sequence(s)

NKLS02000023

UniProtKB/TrEMBL

F1MHX8

Related

ENSBTAP00000044710.3, ENSBTAT00000047505.5

Conserved Domains (5) summary

cd06263
Location:753 → 916

MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...

cd00096
Location:153 → 217

Ig; Immunoglobulin domain

smart00408
Location:254 → 315

IGc2; Immunoglobulin C-2 Type

smart00410
Location:248 → 326

IG_like; Immunoglobulin like

pfam00629
Location:753 → 917

MAM; MAM domain, meprin/A5/mu

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

NC_037350.1 Reference ARS-UCD2.0 Primary Assembly

Range

11546127..11611238 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_024983665.2 → XP_024839433.1 MAM domain-containing glycosylphosphatidylinositol anchor protein 1 isoform X1

Conserved Domains (3) summary

pfam00629
Location:745 → 909

MAM; MAM domain, meprin/A5/mu

pfam13927
Location:43 → 112

Ig_3; Immunoglobulin domain

cl28434
Location:334 → 418

I-set; Immunoglobulin I-set domain