U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

RAB11FIP5 RAB11 family interacting protein 5 [ Bos taurus (domestic cattle) ]

Gene ID: 535992, updated on 4-Oct-2024

Summary

Go to the top of the page Help
Official Symbol
RAB11FIP5provided by VGNC
Official Full Name
RAB11 family interacting protein 5provided by VGNC
Primary source
VGNC:VGNC:54474
See related
BGD:BT26569; Ensembl:ENSBTAG00000006162
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See RAB11FIP5 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 11 NC_037338.1 (11326325..11369717)

Chromosome 11 - NC_037338.1Genomic Context describing neighboring genes Neighboring gene low molecular weight phosphotyrosine protein phosphatase-like Neighboring gene uncharacterized LOC101903097 Neighboring gene microRNA mir-2294 Neighboring gene sideroflexin 5 Neighboring gene empty spiracles homeobox 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_037338.1 Chromosome 11 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulated exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in recycling endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in secretory granule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
rab11 family-interacting protein 5

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001192869.2 → NP_001179798.1  rab11 family-interacting protein 5

    See identical proteins and their annotated locations for NP_001179798.1

    Status: VALIDATED

    Source sequence(s)
    NKLS02000011
    UniProtKB/TrEMBL
    A0A3Q1LQ77
    Related
    ENSBTAP00000059207.1, ENSBTAT00000080594.1
    Conserved Domains (2) summary
    pfam09457
    Location:601 → 648
    RBD-FIP; FIP domain
    cl14603
    Location:21 → 167
    C2; C2 domain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037338.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    11326325..11369717
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024998892.2 → XP_024854660.1  rab11 family-interacting protein 5 isoform X1

    UniProtKB/TrEMBL
    E1BNE5
    Related
    ENSBTAP00000008106.6, ENSBTAT00000008106.7
    Conserved Domains (2) summary
    pfam09457
    Location:1265 → 1312
    RBD-FIP; FIP domain
    cl14603
    Location:21 → 167
    C2; C2 domain

  2. XM_024998893.2 → XP_024854661.1  rab11 family-interacting protein 5 isoform X2

    Conserved Domains (2) summary
    pfam09457
    Location:1169 → 1216
    RBD-FIP; FIP domain
    cl14603
    Location:21 → 167
    C2; C2 domain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.