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TUBA3E tubulin, alpha 3e [ Bos taurus (domestic cattle) ]

Gene ID: 534900, updated on 12-Oct-2024

Summary

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Gene symbol
TUBA3E
Gene description
tubulin, alpha 3e
See related
BGD:BT11808; Ensembl:ENSBTAG00000030979
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
TUBA3; TUBA3D
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Genomic context

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See TUBA3E in Genome Data Viewer
Location:
chromosome: 17
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 17 NC_037344.1 (72342835..72348558, complement)

Chromosome 17 - NC_037344.1Genomic Context describing neighboring genes Neighboring gene leucine zipper like transcription regulator 1 Neighboring gene THAP domain containing 7 Neighboring gene uncharacterized LOC132342663 Neighboring gene leucine rich repeat containing 74B Neighboring gene purinergic receptor P2X 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037344.1 Chromosome 17 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of gene expression profiles in early bovine pregnancy using a custom cDNA microarray. Ishiwata H, et al. Mol Reprod Dev, 2003 May. PMID 12658628
  2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Clone Names

  • MGC133894

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tubulin alpha-3 chain
Names
alpha-tubulin 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001038163.2 → NP_001033252.1  tubulin alpha-3 chain

    See identical proteins and their annotated locations for NP_001033252.1

    Status: PROVISIONAL

    Source sequence(s)
    BC110002
    UniProtKB/Swiss-Prot
    Q32KN8
    UniProtKB/TrEMBL
    F2Z4K0
    Related
    ENSBTAP00000041398.3, ENSBTAT00000043856.4
    Conserved Domains (2) summary
    PTZ00335
    Location:1 → 440
    PTZ00335; tubulin alpha chain; Provisional
    cd02186
    Location:2 → 435
    alpha_tubulin; The alpha-tubulin family

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037344.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    72342835..72348558 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q32KN8.1 GenPept UniProtKB/Swiss-Prot:Q32KN8

Gene LinkOut

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