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WAPL WAPL cohesin release factor [ Bos taurus (domestic cattle) ]

Gene ID: 534322, updated on 4-Oct-2024

Summary

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Official Symbol
WAPLprovided by VGNC
Official Full Name
WAPL cohesin release factorprovided by VGNC
Primary source
VGNC:VGNC:36862
See related
Ensembl:ENSBTAG00000012213
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
WAPAL
Orthologs
human mouse all
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Genomic context

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See WAPL in Genome Data Viewer
Location:
chromosome: 28
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 28 NC_037355.1 (41160834..41238268, complement)

Chromosome 28 - NC_037355.1Genomic Context describing neighboring genes Neighboring gene glutamate ionotropic receptor delta type subunit 1 Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene microRNA mir-346 Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene opsin 4 Neighboring gene LIM domain binding 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037355.1 Chromosome 28 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of chromosome condensation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cohesin loading IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
wings apart-like protein homolog
Names
wings apart-like homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037355.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    41160834..41238268 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024986914.2 → XP_024842682.1  wings apart-like protein homolog isoform X1

    UniProtKB/TrEMBL
    E1BGC3
    Conserved Domains (1) summary
    pfam07814
    Location:641 → 1001
    WAPL; Wings apart-like protein regulation of heterochromatin

  2. XM_005226524.5 → XP_005226581.1  wings apart-like protein homolog isoform X2

    See identical proteins and their annotated locations for XP_005226581.1

    UniProtKB/TrEMBL
    A0A3Q1ML67
    Related
    ENSBTAP00000072396.2, ENSBTAT00000066703.2
    Conserved Domains (1) summary
    pfam07814
    Location:635 → 995
    WAPL; Wings apart-like protein regulation of heterochromatin

  3. XM_002698897.7 → XP_002698943.2  wings apart-like protein homolog isoform X1

    See identical proteins and their annotated locations for XP_002698943.2

    UniProtKB/TrEMBL
    E1BGC3
    Related
    ENSBTAP00000016211.5, ENSBTAT00000016211.7
    Conserved Domains (1) summary
    pfam07814
    Location:641 → 1001
    WAPL; Wings apart-like protein regulation of heterochromatin

  4. XM_059882692.1 → XP_059738675.1  wings apart-like protein homolog isoform X1

    UniProtKB/TrEMBL
    E1BGC3

  5. XM_059882693.1 → XP_059738676.1  wings apart-like protein homolog isoform X3

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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