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DNAJB12 DnaJ heat shock protein family (Hsp40) member B12 [ Bos taurus (domestic cattle) ]

Gene ID: 533603, updated on 4-Oct-2024

Summary

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Official Symbol
DNAJB12provided by VGNC
Official Full Name
DnaJ heat shock protein family (Hsp40) member B12provided by VGNC
Primary source
VGNC:VGNC:55983
See related
Ensembl:ENSBTAG00000013651
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See DNAJB12 in Genome Data Viewer
Location:
chromosome: 28
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 28 NC_037355.1 (28368562..28384883, complement)

Chromosome 28 - NC_037355.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112444749 Neighboring gene uncharacterized LOC112444774 Neighboring gene uncharacterized LOC107131941 Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene mitochondrial calcium uptake 1 Neighboring gene microRNA mir-2891

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037355.1 Chromosome 28 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of bovine mammary gland EST and functional annotation of the Bos taurus gene index. Sonstegard TS, et al. Mamm Genome, 2002 Jul. PMID 12140684
  2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
  3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC133748

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to misfolded protein IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chaperone cofactor-dependent protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily B member 12
Names
DnaJ (Hsp40) homolog, subfamily B, member 12

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001017946.1 → NP_001017946.1  dnaJ homolog subfamily B member 12

    See identical proteins and their annotated locations for NP_001017946.1

    Status: PROVISIONAL

    Source sequence(s)
    BT021535
    UniProtKB/Swiss-Prot
    Q58DR2
    UniProtKB/TrEMBL
    A0AAA9TPE2
    Related
    ENSBTAP00000018144.6, ENSBTAT00000018144.6
    Conserved Domains (2) summary
    pfam00226
    Location:110 → 171
    DnaJ; DnaJ domain
    pfam09320
    Location:268 → 357
    DUF1977; Domain of unknown function (DUF1977)

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037355.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    28368562..28384883 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q58DR2.1 GenPept UniProtKB/Swiss-Prot:Q58DR2

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials