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ZDHHC5 zinc finger DHHC-type palmitoyltransferase 5 [ Bos taurus (domestic cattle) ]

Gene ID: 533250, updated on 4-Oct-2024

Summary

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Official Symbol
ZDHHC5provided by VGNC
Official Full Name
zinc finger DHHC-type palmitoyltransferase 5provided by VGNC
Primary source
VGNC:VGNC:37143
See related
BGD:BT17632; Ensembl:ENSBTAG00000002381
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
DHHC-5
Orthologs
human mouse all
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Genomic context

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See ZDHHC5 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 15 NC_037342.1 (80908881..80931169)

Chromosome 15 - NC_037342.1Genomic Context describing neighboring genes Neighboring gene microRNA mir-130a Neighboring gene yippee like 4 Neighboring gene cleavage factor polyribonucleotide kinase subunit 1 Neighboring gene basic proline-rich protein-like Neighboring gene mediator complex subunit 19 Neighboring gene thioredoxin related transmembrane protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037342.1 Chromosome 15 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein palmitoylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
palmitoyltransferase ZDHHC5
Names
zinc finger DHHC domain-containing protein 5
zinc finger DHHC-type containing 5
NP_001179692.1
XP_005201016.1
XP_024831102.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001192763.3 → NP_001179692.1  palmitoyltransferase ZDHHC5

    See identical proteins and their annotated locations for NP_001179692.1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000015
    UniProtKB/Swiss-Prot
    E1BLT8
    Related
    ENSBTAP00000003078.5, ENSBTAT00000003078.7
    Conserved Domains (2) summary
    pfam01529
    Location:99 → 224
    zf-DHHC; DHHC palmitoyltransferase
    cl26464
    Location:467 → 704
    Atrophin-1; Atrophin-1 family

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037342.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    80908881..80931169
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024975334.2 → XP_024831102.1  palmitoyltransferase ZDHHC5 isoform X1

    UniProtKB/Swiss-Prot
    E1BLT8
    Conserved Domains (2) summary
    pfam01529
    Location:99 → 224
    zf-DHHC; DHHC palmitoyltransferase
    cl26464
    Location:467 → 704
    Atrophin-1; Atrophin-1 family

  2. XM_005200959.4 → XP_005201016.1  palmitoyltransferase ZDHHC5 isoform X1

    See identical proteins and their annotated locations for XP_005201016.1

    UniProtKB/Swiss-Prot
    E1BLT8
    Conserved Domains (2) summary
    pfam01529
    Location:99 → 224
    zf-DHHC; DHHC palmitoyltransferase
    cl26464
    Location:467 → 704
    Atrophin-1; Atrophin-1 family
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
E1BLT8.1 GenPept UniProtKB/Swiss-Prot:E1BLT8

Gene LinkOut

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Molecular Biology Databases
Research Materials