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SNRPE small nuclear ribonucleoprotein polypeptide E [ Bos taurus (domestic cattle) ]

Gene ID: 531493, updated on 4-Oct-2024

Summary

Gene symbol
SNRPE
Gene description
small nuclear ribonucleoprotein polypeptide E
See related
BGD:BT26953; Ensembl:ENSBTAG00000050130
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

See SNRPE in Genome Data Viewer
Location:
chromosome: 16
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 16 NC_037343.1 (1636025..1641981)

Chromosome 16 - NC_037343.1Genomic Context describing neighboring genes Neighboring gene lymphocyte transmembrane adaptor 1 Neighboring gene uncharacterized LOC132342431 Neighboring gene zinc finger CCCH-type containing 11A Neighboring gene uncharacterized LOC104974354 Neighboring gene small ribosomal subunit protein bS21m-like

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037343.1 Chromosome 16 Reference ARS-UCD2.0 Primary Assembly

General gene information

Clone Names

  • MGC140763

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in spliceosomal snRNP assembly IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
part_of U1 snRNP IEA
Inferred from Electronic Annotation
more info
PubMed 
part_of U2 snRNP IEA
Inferred from Electronic Annotation
more info
PubMed 
part_of U4 snRNP IEA
Inferred from Electronic Annotation
more info
PubMed 
part_of U4/U6 x U5 tri-snRNP complex IEA
Inferred from Electronic Annotation
more info
PubMed 
part_of U5 snRNP IEA
Inferred from Electronic Annotation
more info
PubMed 
part_of precatalytic spliceosome IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
small nuclear ribonucleoprotein E
Names
sm protein E
sm-E
smE
snRNP-E

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001083459.2NP_001076928.1  small nuclear ribonucleoprotein E

    See identical proteins and their annotated locations for NP_001076928.1

    Status: PROVISIONAL

    Source sequence(s)
    BC114915
    UniProtKB/Swiss-Prot
    A4FUI2
    UniProtKB/TrEMBL
    F1ME11
    Related
    ENSBTAP00000059185.2, ENSBTAT00000072928.2
    Conserved Domains (1) summary
    cd01718
    Location:1189
    Sm_E; Sm protein E

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037343.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    1636025..1641981
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)