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PSD3 pleckstrin and Sec7 domain containing 3 [ Bos taurus (domestic cattle) ]

Gene ID: 531459, updated on 10-Oct-2024

Summary

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Official Symbol
PSD3provided by VGNC
Official Full Name
pleckstrin and Sec7 domain containing 3provided by VGNC
Primary source
VGNC:VGNC:57317
See related
BGD:BT29707; Ensembl:ENSBTAG00000033137
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See PSD3 in Genome Data Viewer
Location:
chromosome: 27
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 27 NC_037354.1 (38362144..38958167)

Chromosome 27 - NC_037354.1Genomic Context describing neighboring genes Neighboring gene chondroitin sulfate N-acetylgalactosaminyltransferase 1 Neighboring gene 5S ribosomal RNA Neighboring gene SH2 domain containing 4A Neighboring gene N-acetyltransferase 1 (arylamine N-acetyltransferase) Neighboring gene uncharacterized LOC132344073 Neighboring gene leucine rich repeat containing 3B

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037354.1 Chromosome 27 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of ARF protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PH and SEC7 domain-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037354.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    38362144..38958167
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024986357.2 → XP_024842125.2  PH and SEC7 domain-containing protein 3 isoform X1

    Related
    ENSBTAP00000089174.1, ENSBTAT00000130902.1

  2. XM_024986358.2 → XP_024842126.2  PH and SEC7 domain-containing protein 3 isoform X2

  3. XM_059882381.1 → XP_059738364.1  PH and SEC7 domain-containing protein 3 isoform X4

  4. XM_024986360.2 → XP_024842128.1  PH and SEC7 domain-containing protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A3Q1LN16, F1MG15
    Related
    ENSBTAP00000039513.5, ENSBTAT00000039724.6
    Conserved Domains (2) summary
    cd00171
    Location:560 → 710
    Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
    cd13295
    Location:755 → 880
    PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain

  5. XM_024986361.2 → XP_024842129.1  PH and SEC7 domain-containing protein 3 isoform X5

    UniProtKB/TrEMBL
    A0A3Q1LP91, A0AAA9TLI2
    Related
    ENSBTAP00000099306.1, ENSBTAT00000090561.1
    Conserved Domains (2) summary
    cd00171
    Location:526 → 676
    Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
    cd13295
    Location:721 → 846
    PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain

  6. XM_059882382.1 → XP_059738365.1  PH and SEC7 domain-containing protein 3 isoform X6

    Related
    ENSBTAP00000058735.2, ENSBTAT00000075229.2

  7. XM_059882384.1 → XP_059738367.1  PH and SEC7 domain-containing protein 3 isoform X11

  8. XM_024986362.2 → XP_024842130.1  PH and SEC7 domain-containing protein 3 isoform X7

    Conserved Domains (2) summary
    cd00171
    Location:60 → 210
    Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
    cd13295
    Location:255 → 380
    PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain

  9. XM_024986365.2 → XP_024842133.1  PH and SEC7 domain-containing protein 3 isoform X9

    Conserved Domains (2) summary
    cd00171
    Location:50 → 200
    Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
    cd13295
    Location:245 → 370
    PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain

  10. XM_024986364.2 → XP_024842132.1  PH and SEC7 domain-containing protein 3 isoform X8

    UniProtKB/TrEMBL
    A0A3Q1M2L9
    Related
    ENSBTAP00000064050.2, ENSBTAT00000084879.2
    Conserved Domains (2) summary
    cd00171
    Location:50 → 200
    Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
    cd13295
    Location:245 → 370
    PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain

  11. XM_059882385.1 → XP_059738368.1  PH and SEC7 domain-containing protein 3 isoform X12

  12. XM_059882383.1 → XP_059738366.1  PH and SEC7 domain-containing protein 3 isoform X10

    Related
    ENSBTAP00000087750.1, ENSBTAT00000104962.1
Nucleotide Protein Strain
Heading Accession and Version

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