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HES6 hes family bHLH transcription factor 6 [ Bos taurus (domestic cattle) ]

Gene ID: 531384, updated on 10-Oct-2024

Summary

Official Symbol
HES6provided by VGNC
Official Full Name
hes family bHLH transcription factor 6provided by VGNC
Primary source
VGNC:VGNC:29823
See related
BGD:BT13910; Ensembl:ENSBTAG00000054800
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

See HES6 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (117540505..117553580, complement)

Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene erythroferrone Neighboring gene ILK associated serine/threonine phosphatase Neighboring gene uncharacterized LOC132344956 Neighboring gene period circadian regulator 2 Neighboring gene uncharacterized LOC132344957

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

General protein information

Preferred Names
transcription cofactor HES-6
Names
hairy and enhancer of split 6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001075949.1NP_001069417.1  transcription cofactor HES-6

    See identical proteins and their annotated locations for NP_001069417.1

    Status: PROVISIONAL

    Source sequence(s)
    BC118125
    UniProtKB/TrEMBL
    A0A3Q1LSS2, Q17QX8
    Related
    ENSBTAP00000080758.1, ENSBTAT00000104449.1
    Conserved Domains (2) summary
    cd00083
    Location:2375
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
    pfam07527
    Location:96134
    Hairy_orange; Hairy Orange

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    117540505..117553580 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059884652.1XP_059740635.1  transcription cofactor HES-6 isoform X1

    UniProtKB/TrEMBL
    A0AAA9SBB4
  2. XM_015467283.3XP_015322769.1  transcription cofactor HES-6 isoform X2

    Conserved Domains (1) summary
    cd00083
    Location:2370
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...