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TTC33 tetratricopeptide repeat domain 33 [ Bos taurus (domestic cattle) ]

Gene ID: 531278, updated on 17-Aug-2024

Summary

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Official Symbol
TTC33provided by VGNC
Official Full Name
tetratricopeptide repeat domain 33provided by VGNC
Primary source
VGNC:VGNC:36471
See related
BGD:BT14829; Ensembl:ENSBTAG00000000012
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See TTC33 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 20 NC_037347.1 (33708429..33737408)

Chromosome 20 - NC_037347.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132343232 Neighboring gene small nucleolar RNA SNORD72 Neighboring gene ribosomal protein L37 Neighboring gene protein kinase AMP-activated catalytic subunit alpha 1 Neighboring gene prostaglandin E receptor 4 Neighboring gene transfer RNA glutamic acid (anticodon CUC)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037347.1 Chromosome 20 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tetratricopeptide repeat protein 33

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001192705.1 → NP_001179634.1  tetratricopeptide repeat protein 33

    See identical proteins and their annotated locations for NP_001179634.1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000020
    UniProtKB/TrEMBL
    E1BD50
    Related
    ENSBTAP00000000013.4, ENSBTAT00000000013.5
    Conserved Domains (2) summary
    sd00006
    Location:59 → 87
    TPR; TPR repeat [structural motif]
    cl27017
    Location:71 → 182
    YfgC; Putative Zn-dependent protease, contains TPR repeats [General function prediction only]

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037347.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    33708429..33737408
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005221550.5 → XP_005221607.1  tetratricopeptide repeat protein 33 isoform X1

    See identical proteins and their annotated locations for XP_005221607.1

    UniProtKB/TrEMBL
    E1BD50
    Conserved Domains (2) summary
    sd00006
    Location:59 → 87
    TPR; TPR repeat [structural motif]
    cl27017
    Location:71 → 182
    YfgC; Putative Zn-dependent protease, contains TPR repeats [General function prediction only]

  2. XM_005221551.5 → XP_005221608.1  tetratricopeptide repeat protein 33 isoform X1

    See identical proteins and their annotated locations for XP_005221608.1

    UniProtKB/TrEMBL
    E1BD50
    Conserved Domains (2) summary
    sd00006
    Location:59 → 87
    TPR; TPR repeat [structural motif]
    cl27017
    Location:71 → 182
    YfgC; Putative Zn-dependent protease, contains TPR repeats [General function prediction only]

  3. XM_005221549.5 → XP_005221606.1  tetratricopeptide repeat protein 33 isoform X1

    See identical proteins and their annotated locations for XP_005221606.1

    UniProtKB/TrEMBL
    E1BD50
    Conserved Domains (2) summary
    sd00006
    Location:59 → 87
    TPR; TPR repeat [structural motif]
    cl27017
    Location:71 → 182
    YfgC; Putative Zn-dependent protease, contains TPR repeats [General function prediction only]
Nucleotide Protein Strain
Heading Accession and Version

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